HHpred - Homology detection & structure prediction by HMM-HMM comparison

HHpred now runs with HHsearch 1.6.0.0

Input

Paste protein sequence or multiple alignment
or upload a local file
Select input format
 

Search Options

Select HMM databases
(hold Ctr to select several)
StandardGenomes
Max. PSI-BLAST iterations
Score secondary structure
 yes  no  predicted vs predicted only 
Alignment mode
 local  global 
Realign with MAC
 

More options Show

Job Options

Job-ID
 (leave empty for automatic creation)
Send notification to (optional)
 
 
 
Please send feedback to: soeding AT lmb.uni-muenchen.de