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Hhsenser - Results
Job-ID: tu_p5phi6 Date: 15:28 on Oct 22 2009
Strict alignment
Permissive alignment
Rejected
Intermediate
Forward
Save
Export
Forward results to
CS-BLAST
HHpred
PSI-BLAST
alignment with 100 most distinct sequences
reduced alignment: 100 most distinct sequences with inserted residues deleted
Download alignment files:
tu_p5phi6_strict_masterslave.clu
CLUSTAL formatted without inserts
tu_p5phi6_strict_masterslave.fas
FASTA formatted without inserts
tu_p5phi6_strict_masterslave.reduced.fas
FASTA formatted without inserts (with 100 most distinct sequences)
tu_p5phi6_strict.clu
CLUSTAL formatted
tu_p5phi6_strict.a3m
A3M formatted
tu_p5phi6_strict.fas
FASTA formatted
tu_p5phi6_strict.reduced.fas
FASTA formatted (with 100 most distinct sequences)
Master-slave alignment of 100 most distinct sequences:
CLUSTAL ss_pred
CCCC
HHHHHHHHHHHHHHHHH
CCCCCC
HHHHHHHHH
CC
HHHHHHHHHHHHH
C
HHHHH
CCCCC
EEEE
HHHHHHHHHHHHHH
CCCC
HHHH
EEEEE
HHH
EEEE
ss_conf 9850088999999986546404663143668888527512366889998765154531677057761666689999887608866573034332143773 gi|1353222|sp|P075
M
S
K
D
SA
F
A
V
Q
Y
S
L
R
A
L
G
Q
K
V
R
A
D
G
VV
GS
E
T
R
AA
L
D
A
L
P
E
NQ
KK
A
IV
E
L
Q
A
LL
P
K
A
Q
S
V
G
NN
R
V
R
F
TTA
E
V
D
SA
V
A
R
I
S
Q
K
I
G
V
P
AS
YY
Q
F
LI
P
I
E
N
F
VV
A ss_pred
CC
EEEEEE
CCCCC
HHHHHHHHHHHHHHH
CCCCCC
HH
CC
HHHH
C
HHHHHHHHH
EE
CCC
HHHHHH
CCCC
EE
HHHHHHHHH
CCCCC
HHHHHH
CCCC
EE
CCCC
H
ss_conf 4514664024121334406779999986058951101447645147653110240305665322651001466788834798468876225725315510 gi|1353222|sp|P075 GG
F
E
TT
V
SGS
F
R
G
L
G
Q
F
N
R
Q
T
W
D
R
L
RR
L
G
R
N
L
P
A
F
EE
GSA
Q
L
N
AS
L
Y
A
I
G
F
L
Y
L
E
N
KR
A
Y
E
AS
F
K
G
R
V
F
T
H
E
I
A
Y
L
Y
H
NQ
GA
P
AA
E
Q
Y
L
TSG
R
LV
Y
P
K
Q
S ss_pred
HHHHHHHHHHHHHHHHH
CCC
ss_conf 88999999986404433129 gi|1353222|sp|P075
E
AA
V
AA
V
AAA
R
NQ
H
V
K
E
S
W
A