Kalign

Input

Enter sequences in FASTA format
or upload a local file
 

Options

Output sequence order
 Input   Tree   Gaps  
Gap open penalty
 
Gap extension penalty
 
Terminal gap penalties
 
Bonus score
 
 

Job Options

Job-ID
 (leave empty for automatic creation)
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Timo Lassmann and Erik LL Sonnhammer (2005) Kalign - an accurate and fast multiple sequence alignment algorithm
BMC Bioinformatics 2005, 6:298 doi:10.1186/1471-2105-6-298